BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H10SP1|AL430775
(938 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 1801 0.0
>3x_Contig1602
Length = 12694
Score = 1801 bits (904), Expect = 0.0
Identities = 927/936 (99%), Gaps = 2/936 (0%)
Strand = Plus / Minus
Query: 1 atctgataaagatgaktcaggatctttccccttataatctggtcccagtagtttcattct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 atctgataaagatgactcaggatctttccccttataatctggtcccagtagtttcattct 3157
Query: 61 tatattcttttcgacggtctctttatccgaacaaatactttctaggaacaaaactttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 tatattcttttcgacggtctctttatccgaacaaatactttctaggaacaaaactttgat 3097
Query: 121 gaatttatttctttcatgaatctttttaagaatcatcctacgcctttctttagtggaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 gaatttatttctttcatgaatctttttaagaatcatcctacgcctttctttagtggaatt 3037
Query: 181 agttgcatmaaagattccaactgagcctgggccattcaataaawattctaaragttggtc 240
|||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 3036 agttgcatcaaagattccaactgagcctgggccattcaataaatattctaaaagttggtc 2977
Query: 241 caaagtgtcaagagcccatttattccttaacatcttggaatgctcgtcgtccggatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 caaagtgtcaagagcccatttattccttaacatcttggaatgctcgtcgtccggatcaaa 2917
Query: 301 aaaatttgaatcctgttccttcatgttatgttcttttgcaaattgccttctagtattacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 aaaatttgaatcctgttccttcatgttatgttcttttgcaaattgccttctagtattacc 2857
Query: 361 cacattgaacactttacaataatacatggaatagttcaagtacctggataatttatttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 cacattgaacactttacaataatacatggaatagttcaagtacctggataatttatttgt 2797
Query: 421 aatgaacgattttcctgtcgcaggcaacccgaccattatgatgatcaacttggaccccgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2796 aatgaacgattttcctgtcgcaggcaacccgaccattatgatgatcaacttggaccccgg 2737
Query: 481 atmcttttgagatataataccatcgggagaagtcttagattttgtcaaccccggcacatc 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2736 atccttttgagatataataccatcgggagaagtcttagattttgtcaaccccggcacatc 2677
Query: 541 gatagtggtgggcctccttttcggtaccatatgagacggtgggtgattttcaagcatcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2676 gatagtggtgggcctccttttcggtaccatatgagacggtgggtgattttcaagcatcga 2617
Query: 601 ctggtcctgccaatctatcatgcgccgctttggaacccattctcggaagaaagttgttct 660
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2616 ctggtcctgccaatct-tc-tgcgccgctttggaacccattctcggaagaaagttgttct 2559
Query: 661 tcagtgaccggtcccaacacaggagacccagttggtgaagtgctccttgaactttgagga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2558 tcagtgaccggtcccaacacaggagacccagttggtgaagtgctccttgaactttgagga 2499
Query: 721 gacgtctcagcagaagtctctactgaactactgggagactggaacctaraaacaacgggc 780
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2498 gacgtctcagcagaagtctctactgaactactgggagactggaacctagaaacaacgggc 2439
Query: 781 gtatcacttaaaggccgcttttgaaactgaggtaaattatcaacctcgtagattccatcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2438 gtatcacttaaaggccgcttttgaaactgaggtaaattatcaacctcgtagattccatcc 2379
Query: 841 tcattctcatccattttcaattgtgtcgcttgatcatgtctcttatcttcgatggactgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2378 tcattctcatccattttcaattgtgtcgcttgatcatgtctcttatcttcgatggactgt 2319
Query: 901 gtaggttccaactcggaatctgaactagaaacmaaa 936
|||||||||||||||||||||||||||||||| |||
Sbjct: 2318 gtaggttccaactcggaatctgaactagaaaccaaa 2283
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6494
Number of Sequences: 1807
Number of extensions: 6494
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)